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BMCBI
2008
154views more  BMCBI 2008»
15 years 6 months ago
Extension of the COG and arCOG databases by amino acid and nucleotide sequences
Background: The current versions of the COG and arCOG databases, both excellent frameworks for studies in comparative and functional genomics, do not contain the nucleotide sequen...
Florian Meereis, Michael Kaufmann
SAC
2009
ACM
16 years 1 months ago
HIVSetSubtype: software for subtype classification of HIV-1 sequences
An automated web based tool for assigning HIV-1 pure and recombinant subtypes within unaligned sequences is presented. The system combines the BLAST search algorithm and the recom...
Luciano Vieira de Araújo, Sabri S. Sanabani...
WG
2004
Springer
15 years 11 months ago
Minimal de Bruijn Sequence in a Language with Forbidden Substrings
Let be the following strategy to construct a walk in a labeled digraph: at each vertex, we follow the unvisited arc of minimum label. In this work we study for which languages, app...
Eduardo Moreno, Martín Matamala
ECCV
2000
Springer
16 years 8 months ago
Reconstruction from Uncalibrated Sequences with a Hierarchy of Trifocal Tensors
This paper considers projective reconstruction with a hierarchical computational structure of trifocal tensors that integrates feature tracking and geometrical validation of the f...
David Nistér
HPCC
2009
Springer
15 years 11 months ago
Load Scheduling Strategies for Parallel DNA Sequencing Applications
This paper studies a load scheduling strategy with nearoptimal processing time leveraging the computational characteristics of parallel DNA sequence alignment algorithms, specific...
Sudha Gunturu, Xiaolin Li, Laurence Tianruo Yang