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TCS
2010
15 years 1 months ago
Information measures for infinite sequences
We revisit the notion of computational depth and sophistication for infinite sequences and study the density of the sets of deep and sophisticated infinite sequences. Koppel defin...
Luis Filipe Coelho Antunes, Andre Souto
ICPP
2007
IEEE
16 years 22 days ago
Efficient Parallel Algorithm for Optimal Three-Sequences Alignment
Sequence alignment is a fundamental problem in the computational biology. Many alignment methods have been proposed in the literature, such as pair-wise sequence alignment (2SA), ...
Chun-Yuan Lin, Chen Tai Huang, Yeh-Ching Chung, Ch...
CVPR
2009
IEEE
17 years 1 months ago
A Similarity Measure Between Vector Sequences with Application to Handwritten Word Image Retrieval
This article proposes a novel similarity measure between vector sequences. Recently, a model-based approach was introduced to address this issue. It consists in modeling each se...
José A. Rodríguez-Serrano, Florent P...
IPPS
2006
IEEE
16 years 13 days ago
Parallel multiple sequence alignment with local phylogeny search by simulated annealing
The problem of multiple sequence alignment is one of the most important problems in computational biology. In this paper we present a new method that simultaneously performs multi...
Jaroslaw Zola, Denis Trystram, Andrei Tchernykh, C...
ISMB
1994
15 years 7 months ago
An Efficient Method for Multiple Sequence Alignment
Multiple sequence alignment has been a useful methodin the study of molecular evolution and sequence-structure relationships. This paper presents a newmethodfor multiple sequence ...
Jin Kim, Sakti Pramanik