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BMCBI
2010
153views more  BMCBI 2010»
15 years 6 months ago
Pash 3.0: A versatile software package for read mapping and integrative analysis of genomic and epigenomic variation using massi
Background: Massively parallel sequencing readouts of epigenomic assays are enabling integrative genome-wide analyses of genomic and epigenomic variation. Pash 3.0 performs sequen...
Cristian Coarfa, Fuli Yu, Christopher A. Miller, Z...
BMCBI
2005
109views more  BMCBI 2005»
15 years 6 months ago
Genome comparison without alignment using shortest unique substrings
Background: Sequence comparison by alignment is a fundamental tool of molecular biology. In this paper we show how a number of sequence comparison tasks, including the detection o...
Bernhard Haubold, Nora Pierstorff, Friedrich M&oum...
PC
2010
190views Management» more  PC 2010»
15 years 4 months ago
High-performance cone beam reconstruction using CUDA compatible GPUs
Compute unified device architecture (CUDA) is a software development platform that allows us to run C-like programs on the nVIDIA graphics processing unit (GPU). This paper prese...
Yusuke Okitsu, Fumihiko Ino, Kenichi Hagihara
ICCAD
2006
IEEE
127views Hardware» more  ICCAD 2006»
16 years 3 months ago
Joint design-time and post-silicon minimization of parametric yield loss using adjustable robust optimization
Parametric yield loss due to variability can be effectively reduced by both design-time optimization strategies and by adjusting circuit parameters to the realizations of variable...
Murari Mani, Ashish Kumar Singh, Michael Orshansky
TMC
2010
130views more  TMC 2010»
15 years 4 months ago
SYNAPSE++: Code Dissemination in Wireless Sensor Networks Using Fountain Codes
—This paper presents SYNAPSE++, a system for over the air reprogramming of wireless sensor networks (WSNs). In contrast to previous solutions, which implement plain negative ackn...
Michele Rossi, Nicola Bui, Giovanni Zanca, Luca St...