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ECCC
2006
145views more  ECCC 2006»
15 years 6 months ago
Constraint satisfaction: a personal perspective
Attempts at classifying computational problems as polynomial time solvable, NP-complete, or belonging to a higher level in the polynomial hierarchy, face the difficulty of undecid...
Tomás Feder
BMCBI
2007
133views more  BMCBI 2007»
15 years 6 months ago
An efficient pseudomedian filter for tiling microrrays
Background: Tiling microarrays are becoming an essential technology in the functional genomics toolbox. They have been applied to the tasks of novel transcript identification, elu...
Thomas E. Royce, Nicholas Carriero, Mark B. Gerste...
MST
2006
149views more  MST 2006»
15 years 6 months ago
Parameterized Intractability of Distinguishing Substring Selection
A central question in computational biology is the design of genetic markers to distinguish between two given sets of (DNA) sequences. This question is formalized as the NP-comple...
Jens Gramm, Jiong Guo, Rolf Niedermeier
ALGORITHMICA
2005
195views more  ALGORITHMICA 2005»
15 years 6 months ago
Bit-Parallel Witnesses and Their Applications to Approximate String Matching
We present a new bit-parallel technique for approximate string matching. We build on two previous techniques. The first one, BPM [Myers, J. of the ACM, 1999], searches for a patte...
Heikki Hyyrö, Gonzalo Navarro
TOG
2008
197views more  TOG 2008»
15 years 6 months ago
Two-way coupling of fluids to rigid and deformable solids and shells
We propose a novel solid/fluid coupling method that treats the coupled system in a fully implicit manner making it stable for arbitrary time steps, large density ratios, etc. In c...
Avi Robinson-Mosher, Tamar Shinar, Jon Gretarsson,...
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