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BMCBI
2010
112views more  BMCBI 2010»
15 years 6 months ago
Computational identification of rare codons of Escherichia coli based on codon pairs preference
Background: Codon bias is believed to play an important role in the control of gene expression. In Escherichia coli, some rare codons, which can limit the expression level of exog...
Xianming Wu, Songfeng Wu, Dong Li, Jiyang Zhang, L...
SOFSEM
2007
Springer
16 years 14 days ago
Indexing Factors with Gaps
Indexing of factors is a widely used and useful technique in stringology and can be seen as a tool in solving diverse text algorithmic problems. A gapped-factor is a concatenation ...
M. Sohel Rahman, Costas S. Iliopoulos
BMCBI
2006
120views more  BMCBI 2006»
15 years 6 months ago
A factor analysis model for functional genomics
Background: Expression array data are used to predict biological functions of uncharacterized genes by comparing their expression profiles to those of characterized genes. While b...
Rafal Kustra, Romy Shioda, Mu Zhu
WAOA
2005
Springer
170views Algorithms» more  WAOA 2005»
15 years 12 months ago
On Approximating Restricted Cycle Covers
A cycle cover of a graph is a set of cycles such that every vertex is part of exactly one cycle. An L-cycle cover is a cycle cover in which the length of every cycle is in the set...
Bodo Manthey
CVPR
2003
IEEE
16 years 8 months ago
Degeneracies, Dependencies and their Implications in Multi-body and Multi-Sequence Factorizations
The body of work on multi-body factorization separates between objects whose motions are independent. In this work we show that in many cases objects moving with different 3D moti...
Lihi Zelnik-Manor, Michal Irani