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RECOMB
2004
Springer
16 years 7 months ago
Chromosomal breakpoint re-use in the inference of genome sequence rearrangement
In order to apply gene-order rearrangement algorithms to the comparison of genome sequences, Pevzner and Tesler [9] bypass gene finding and ortholog identification, and use the or...
David Sankoff, Phil Trinh
175
Voted
RECOMB
2004
Springer
16 years 7 months ago
A discriminative model for identifying spatial cis-regulatory modules
Transcriptional regulation is mediated by the coordinated binding of transcription factors to the upstream regions of genes. In higher eukaryotes, the binding sites of cooperating...
Eran Segal, Roded Sharan
RECOMB
2002
Springer
16 years 7 months ago
Deconvolving sequence variation in mixed DNA populations
We present an original approach to identifying sequence variants in a mixed DNA population from sequence trace data. The heart of the method is based on parsimony: given a wildtyp...
Andy Wildenberg, Steven Skiena, Pavel Sumazin
SIGMOD
2007
ACM
187views Database» more  SIGMOD 2007»
16 years 7 months ago
P-ring: an efficient and robust P2P range index structure
Data availability, collection and storage have increased dramatically in recent years, raising new technological and algorithmic challenges for database design and data management...
Adina Crainiceanu, Prakash Linga, Ashwin Machanava...
186
Voted
EDBT
2004
ACM
141views Database» more  EDBT 2004»
16 years 7 months ago
HEAVEN: A Hierarchical Storage and Archive Environment for Multidimensional Array Database Management Systems
Abstract. The intention of this paper is to present HEAVEN, a solution of intelligent management of large-scale datasets held on tertiary storage systems. We introduce the common s...
Bernd Reiner, Karl Hahn
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