In order to apply gene-order rearrangement algorithms to the comparison of genome sequences, Pevzner and Tesler [9] bypass gene finding and ortholog identification, and use the or...
Transcriptional regulation is mediated by the coordinated binding of transcription factors to the upstream regions of genes. In higher eukaryotes, the binding sites of cooperating...
We present an original approach to identifying sequence variants in a mixed DNA population from sequence trace data. The heart of the method is based on parsimony: given a wildtyp...
Data availability, collection and storage have increased dramatically in recent years, raising new technological and algorithmic challenges for database design and data management...
Abstract. The intention of this paper is to present HEAVEN, a solution of intelligent management of large-scale datasets held on tertiary storage systems. We introduce the common s...