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BMCBI
2006
101views more  BMCBI 2006»
15 years 6 months ago
SuperMimic - Fitting peptide mimetics into protein structures
Background: Various experimental techniques yield peptides that are biologically active but have unfavourable pharmacological properties. The design of structurally similar organi...
Andrean Goede, Elke Michalsky, Ulrike Schmidt, Rob...
BMCBI
2007
202views more  BMCBI 2007»
15 years 6 months ago
ProtNet: a tool for stochastic simulations of protein interaction networks dynamics
Background: Protein interactions support cell organization and mediate its response to any specific stimulus. Recent technological advances have produced large data-sets that aim ...
Massimo Bernaschi, Filippo Castiglione, Alessandra...
BMCBI
2005
107views more  BMCBI 2005»
15 years 6 months ago
An edit script for taxonomic classifications
Abstract. Taxonomy provides one of the most powerful ways to navigate sequence data bases but currently, users are forced to formulate queries according to a single taxonomic class...
Roderic D. M. Page, Gabriel Valiente
SIGCSE
2009
ACM
139views Education» more  SIGCSE 2009»
16 years 7 months ago
Abstraction and extensibility in digital logic simulation software
ion and Extensibility in Digital Logic Simulation Software Richard M. Salter and John L. Donaldson Computer Science Department Oberlin College Oberlin, OH 44074 rms@cs.oberlin.edu,...
Richard M. Salter, John L. Donaldson
IPPS
2009
IEEE
16 years 1 months ago
Exploring FPGAs for accelerating the phylogenetic likelihood function
Driven by novel biological wet lab techniques such as pyrosequencing there has been an unprecedented molecular data explosion over the last 2-3 years. The growth of biological seq...
Nikolaos Alachiotis, Euripides Sotiriades, Apostol...