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ALGORITHMICA
2005
195views more  ALGORITHMICA 2005»
15 years 6 months ago
Bit-Parallel Witnesses and Their Applications to Approximate String Matching
We present a new bit-parallel technique for approximate string matching. We build on two previous techniques. The first one, BPM [Myers, J. of the ACM, 1999], searches for a patte...
Heikki Hyyrö, Gonzalo Navarro
BMCBI
2005
94views more  BMCBI 2005»
15 years 6 months ago
A method for finding single-nucleotide polymorphisms with allele frequencies in sequences of deep coverage
Background: The allele frequencies of single-nucleotide polymorphisms (SNPs) are needed to select an optimal subset of common SNPs for use in association studies. Sequence-based m...
Jianmin Wang, Xiaoqiu Huang
TPDS
2008
196views more  TPDS 2008»
15 years 6 months ago
End-to-End Energy Management in Networked Real-Time Embedded Systems
Recent technological advances have opened up a wide range of distributed real-time applications involving battery-driven embedded devices with local processing and wireless communi...
G. Sudha Anil Kumar, Govindarasu Manimaran, Zhengd...
JPDC
2007
167views more  JPDC 2007»
15 years 6 months ago
On the design of high-performance algorithms for aligning multiple protein sequences on mesh-based multiprocessor architectures
In this paper, we address the problem of multiple sequence alignment (MSA) for handling very large number of proteins sequences on mesh-based multiprocessor architectures. As the ...
Diana H. P. Low, Bharadwaj Veeravalli, David A. Ba...
COMPUTER
2002
75views more  COMPUTER 2002»
15 years 6 months ago
GUI Testing: Pitfalls and Process
ion, so mapping between GUI events and the underlying code is not straightforward. Code-based coverage criteria do not necessarily address problematic interactions between the GUI&...
Atif M. Memon
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