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» Computer algebra in systems biology
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CMSB
2009
Springer
16 years 29 days ago
Probabilistic Approximations of Signaling Pathway Dynamics
Systems of ordinary differential equations (ODEs) are often used to model the dynamics of complex biological pathways. We construct a discrete state model as a probabilistic appro...
Bing Liu, P. S. Thiagarajan, David Hsu
ESCIENCE
2006
IEEE
16 years 13 days ago
A Middleware Framework for Maximum Likelihood Evaluation over Dynamic Grids
We have designed a maximum likelihood fitter using the actor model to distribute the computation over a heterogeneous network. The prototype implementation uses the SALSA program...
Wei-Jen Wang, Kaoutar El Maghraoui, John Cummings,...
ASM
2005
ASM
15 years 12 months ago
Time in State Machines
State machines are considered a very general means of expressing computations in an implementation-independent way. There are also ways to extend the general state machine framewor...
Susanne Graf, Andreas Prinz
EAGC
2004
Springer
15 years 11 months ago
Pegasus: Mapping Scientific Workflows onto the Grid
In this paper we describe the Pegasus system that can map complex workflows onto the Grid. takes an abstract description of a workflow and finds the appropriate data and Grid reso...
Ewa Deelman, James Blythe, Yolanda Gil, Carl Kesse...
CVPR
2003
IEEE
15 years 11 months ago
Graph-Theoretic Approach to Clustering and Segmentation
We develop a framework for the image segmentation problem based on a new graph-theoretic formulation of clustering. The approach is motivated by the analogies between the intuitiv...
Massimiliano Pavan, Marcello Pelillo