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POPL
2006
ACM
16 years 6 months ago
A hierarchical model of data locality
In POPL 2002, Petrank and Rawitz showed a universal result-finding optimal data placement is not only NP-hard but also impossible to approximate within a constant factor if P = NP...
Chengliang Zhang, Chen Ding, Mitsunori Ogihara, Yu...
RECOMB
2007
Springer
16 years 6 months ago
A Bayesian Model That Links Microarray mRNA Measurements to Mass Spectrometry Protein Measurements
Abstract. An important problem in biology is to understand correspondences between mRNA microarray levels and mass spectrometry peptide counts. Recently, a compendium of mRNA expre...
Anitha Kannan, Andrew Emili, Brendan J. Frey
RECOMB
2005
Springer
16 years 6 months ago
RNA-RNA Interaction Prediction and Antisense RNA Target Search
Abstract. Recent studies demonstrating the existence of special non-coding "antisense" RNAs used in post-transcriptional gene regulation have received considerable attent...
Can Alkan, Emre Karakoç, Joseph H. Nadeau, ...
RECOMB
2010
Springer
16 years 1 months ago
A Novel Abundance-Based Algorithm for Binning Metagenomic Sequences Using l-Tuples
Abstract. Metagenomics is the study of microbial communities sampled directly from their natural environment, without prior culturing. Among the computational tools recently develo...
Yu-Wei Wu, Yuzhen Ye
CCS
2009
ACM
16 years 27 days ago
Large-scale malware indexing using function-call graphs
A major challenge of the anti-virus (AV) industry is how to effectively process the huge influx of malware samples they receive every day. One possible solution to this problem i...
Xin Hu, Tzi-cker Chiueh, Kang G. Shin