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TCBB
2010
104views more  TCBB 2010»
15 years 5 months ago
Fast Hinge Detection Algorithms for Flexible Protein Structures
— Analysis of conformational changes is one of the keys to the understanding of protein functions and interactions. For the analysis, we often compare two protein structures, tak...
Tetsuo Shibuya
IPPS
2010
IEEE
15 years 4 months ago
Enhancing adaptive middleware for quantum chemistry applications with a database framework
Quantum chemistry applications such as the General Atomic and Molecular Electronic Structure System (GAMESS) that can execute on a complex peta-scale parallel computing environment...
Lakshminarasimhan Seshagiri, Meng-Shiou Wu, Masha ...
IPPS
2010
IEEE
15 years 4 months ago
Inter-block GPU communication via fast barrier synchronization
The graphics processing unit (GPU) has evolved from a fixedfunction processor with programmable stages to a programmable processor with many fixed-function components that deliver...
Shucai Xiao, Wu-chun Feng
HPCC
2009
Springer
15 years 4 months ago
Graph-Based Task Replication for Workflow Applications
Abstract--The Grid is an heterogeneous and dynamic environment which enables distributed computation. This makes it a technology prone to failures. Some related work uses replicati...
Raúl Sirvent, Rosa M. Badia, Jesús L...
CONCURRENCY
2010
172views more  CONCURRENCY 2010»
15 years 4 months ago
Modeling of tsunami waves and atmospheric swirling flows with graphics processing unit (GPU) and radial basis functions (RBF)
The faster growth curves in the speed of GPUs relative to CPUs in the past decade and its rapidly gained popularity have spawned a new area of development in computational technol...
Jessica Schmidt, Cécile Piret, Nan Zhang, B...
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