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LICS
2008
IEEE
16 years 1 months ago
A Logical Characterization of Individual-Based Models
Individual-based models are a relatively new approach to modelling dynamical systems of interacting entities, for example molecules in a biological cell. Although they are computa...
James F. Lynch
COMPLEX
2009
Springer
15 years 10 months ago
A Comparative Analysis of Specific Spatial Network Topological Models
Creating ensembles of random but "realistic" topologies for complex systems is crucial for many tasks such as benchmark generation and algorithm analysis. In general, exp...
Jun Wang, Gregory M. Provan
SAC
2008
ACM
15 years 6 months ago
Bayesian inference for a discretely observed stochastic kinetic model
The ability to infer parameters of gene regulatory networks is emerging as a key problem in systems biology. The biochemical data are intrinsically stochastic and tend to be observ...
Richard J. Boys, Darren J. Wilkinson, Thomas B. L....
VIS
2004
IEEE
170views Visualization» more  VIS 2004»
16 years 8 months ago
Guaranteed Quality Triangulation of Molecular Skin Surfaces
We present an efficient algorithm to mesh the macromolecules surface model represented by the skin surface defined by Edelsbrunner. Our algorithm overcomes several challenges resi...
Ho-Lun Cheng, Xinwei Shi
DILS
2006
Springer
15 years 10 months ago
Data Access and Integration in the ISPIDER Proteomics Grid
Abstract. Grid computing has great potential for supporting the integration of complex, fast changing biological data repositories to enable distributed data analysis. One scenario...
Lucas Zamboulis, Hao Fan, Khalid Belhajjame, Jenni...