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ASM
2010
ASM
16 years 1 months ago
A Basis for Feature-Oriented Modelling in Event-B
Abstract. Feature-oriented modelling is a well-known approach for Software Product Line (SPL) development. It is a widely used method when developing groups of related software. Wi...
Jennifer Sorge, Michael Poppleton, Michael Butler
CIBCB
2007
IEEE
16 years 24 days ago
Multiple Sequence Alignment using Fuzzy Logic
—DNA matching is a crucial step in sequence alignment. Since sequence alignment is an approximate matching process there is a need for good approximate algorithms. The process of...
Sara Nasser, Gregory Vert, Monica N. Nicolescu, Al...
ICASSP
2007
IEEE
16 years 23 days ago
Fast Search of Sequences with Complex Symbol Correlations using Profile Context-Sensitive HMMS and Pre-Screening Filters
Recently, profile context-sensitive HMMs (profile-csHMMs) have been proposed which are very effective in modeling the common patterns and motifs in related symbol sequences. Pro...
Byung-Jun Yoon, P. P. Vaidyanathan
SPIRE
2007
Springer
16 years 17 days ago
Approximate String Matching with Lempel-Ziv Compressed Indexes
Abstract. A compressed full-text self-index for a text T is a data structure requiring reduced space and able of searching for patterns P in T. Furthermore, the structure can repro...
Luís M. S. Russo, Gonzalo Navarro, Arlindo ...
CIBCB
2006
IEEE
16 years 15 days ago
Motif Evaluation by Leave-one-out Scoring
Abstract— We propose a new method for collecting information on regulatory elements found by any motif discovery program. We suggest that combining the results of n leave-oneout ...
Audrey Girouard, Noah W. Smith, Donna K. Slonim