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PSB
2001
15 years 7 months ago
A Multithreaded Parallel Implementation of a Dynamic Programming Algorithm for Sequence Comparison
This paper discusses the issues involved in implementing a dynamic programming algorithm for biological sequence comparison on a generalpurpose parallel computing platform based o...
W. S. Martins, Juan del Cuvillo, F. J. Useche, Kev...
GECCO
2004
Springer
15 years 12 months ago
A Systematic Study of Genetic Algorithms with Genotype Editing
Abstract. This paper continues our systematic study of an RNAediting computational model of Genetic Algorithms (GA). This model is constructed based on several genetic editing char...
Chien-Feng Huang, Luis Mateus Rocha
KDD
2008
ACM
243views Data Mining» more  KDD 2008»
16 years 6 months ago
Permu-pattern: discovery of mutable permutation patterns with proximity constraint
Pattern discovery in sequences is an important problem in many applications, especially in computational biology and text mining. However, due to the noisy nature of data, the tra...
Meng Hu, Jiong Yang, Wei Su
KDD
2002
ACM
125views Data Mining» more  KDD 2002»
16 years 6 months ago
Pattern discovery in sequences under a Markov assumption
In this paper we investigate the general problem of discovering recurrent patterns that are embedded in categorical sequences. An important real-world problem of this nature is mo...
Darya Chudova, Padhraic Smyth
ASM
2010
ASM
16 years 1 months ago
Secrecy UML Method for Model Transformations
Abstract. This paper introduces the subject of secrecy models development by transformation, with formal validation. In an enterprise, constructing a secrecy model is a participato...
Waël Hassan, Nadera Slimani, Kamel Adi, Luigi...