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BMCBI
2004
196views more  BMCBI 2004»
15 years 6 months ago
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
Background: In a previous paper, we introduced MUSCLE, a new program for creating multiple alignments of protein sequences, giving a brief summary of the algorithm and showing MUS...
Robert C. Edgar
FGCS
2006
121views more  FGCS 2006»
15 years 6 months ago
Real-time multi-scale brain data acquisition, assembly, and analysis using an end-to-end OptIPuter
At iGrid 2005 we demonstrated the transparent operation of a biology experiment on a test-bed of globally distributed visualization, storage, computational, and network resources....
Rajvikram Singh, Nicholas Schwarz, Nut Taesombut, ...
BMCBI
2008
95views more  BMCBI 2008»
15 years 6 months ago
PURE: A webserver for the prediction of domains in unassigned regions in proteins
Background: Protein domains are the structural and functional units of proteins. The ability to parse proteins into different domains is important for effective classification, un...
Chilamakuri C. S. Reddy, Khader Shameer, Bernard O...
BMCBI
2008
129views more  BMCBI 2008»
15 years 6 months ago
Motif-directed network component analysis for regulatory network inference
Background: Network Component Analysis (NCA) has shown its effectiveness in discovering regulators and inferring transcription factor activities (TFAs) when both microarray data a...
Chen Wang, Jianhua Xuan, Li Chen, Po Zhao, Yue Wan...
ICDM
2006
IEEE
134views Data Mining» more  ICDM 2006»
16 years 17 days ago
Fast Frequent Free Tree Mining in Graph Databases
Free tree, as a special graph which is connected, undirected and acyclic, is extensively used in domains such as computational biology, pattern recognition, computer networks, XML...
Peixiang Zhao, Jeffrey Xu Yu