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ALGORITHMICA
2006
77views more  ALGORITHMICA 2006»
15 years 6 months ago
Scalable Parallel Algorithms for FPT Problems
Algorithmic methods based on the theory of fixed-parameter tractability are combined with powerful computational platforms to launch systematic attacks on combinatorial problems o...
Faisal N. Abu-Khzam, Michael A. Langston, Pushkar ...
DATE
2009
IEEE
159views Hardware» more  DATE 2009»
16 years 1 months ago
Design and implementation of a database filter for BLAST acceleration
— BLAST is a very popular Computational Biology algorithm. Since it is computationally expensive it is a natural target for acceleration research, and many reconfigurable archite...
Panagiotis Afratis, Constantinos Galanakis, Euripi...
ALMOB
2006
80views more  ALMOB 2006»
15 years 6 months ago
Pattern statistics on Markov chains and sensitivity to parameter estimation
Background: In order to compute pattern statistics in computational biology a Markov model is commonly used to take into account the sequence composition. Usually its parameter mu...
Grégory Nuel
CVPR
2009
IEEE
1528views Computer Vision» more  CVPR 2009»
16 years 10 months ago
Structured Output-Associative Regression
Structured outputs such as multidimensional vectors or graphs are frequently encountered in real world pattern recognition applications such as computer vision, natural language pr...
Liefeng Bo and Cristian Sminchisescu
HIPC
2005
Springer
16 years 3 days ago
Design and Implementation of the HPCS Graph Analysis Benchmark on Symmetric Multiprocessors
Graph theoretic problems are representative of fundamental computations in traditional and emerging scientific disciplines like scientific computing, computational biology and b...
David A. Bader, Kamesh Madduri