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SP
2008
IEEE
122views Security Privacy» more  SP 2008»
15 years 6 months ago
Large-scale phylogenetic analysis on current HPC architectures
Abstract. Phylogenetic inference is considered a grand challenge in Bioinformatics due to its immense computational requirements. The increasing popularity and availability of larg...
Michael Ott, Jaroslaw Zola, Srinivas Aluru, Andrew...
BIOADIT
2004
Springer
15 years 10 months ago
Embryonic Machines That Divide and Differentiate
After defining a Universe for computer science in opposition to the Universe of biology, this paper presents the roles that cellular division plays in both of them. Based on the ni...
Daniel Mange, André Stauffer, Enrico Petrag...
ACL
2009
15 years 4 months ago
Automatic Cost Estimation for Tree Edit Distance Using Particle Swarm Optimization
Recently, there is a growing interest in working with tree-structured data in different applications and domains such as computational biology and natural language processing. Mor...
Yashar Mehdad
TOG
2012
222views Communications» more  TOG 2012»
13 years 9 months ago
Plastic trees: interactive self-adapting botanical tree models
We present a dynamic tree modeling and representation technique that allows complex tree models to interact with their environment. Our method uses changes in the light distributi...
Sören Pirk, Ondrej Stava, Julian Kratt, Miche...
BMCBI
2008
164views more  BMCBI 2008»
15 years 6 months ago
Word correlation matrices for protein sequence analysis and remote homology detection
Background: Classification of protein sequences is a central problem in computational biology. Currently, among computational methods discriminative kernel-based approaches provid...
Thomas Lingner, Peter Meinicke