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183
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RECOMB
2005
Springer
16 years 7 months ago
2005
Springer
Abstract. Identification of homologous chromosomal regions is important for understanding evolutionary processes that shape genome evolution, such as genome rearrangements and larg...
182
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RECOMB
2005
Springer
16 years 7 months ago
2005
Springer
Abstract. Current approaches for identification and detection of transcription factor binding sites rely on an extensive set of known target genes. Here we describe a novel structu...
160
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RECOMB
2005
Springer
16 years 7 months ago
2005
Springer
The multiple species de novo gene prediction problem can be stated as follows: given an alignment of genomic sequences from two or more organisms, predict the location and structur...
166
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RECOMB
2005
Springer
16 years 7 months ago
2005
Springer
We introduce a new scoring method for calculation of alignments of optical maps. Missing cuts, false cuts, and sizing errors present in optical maps are addressed by our alignment...
169
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RECOMB
2005
Springer
16 years 7 months ago
2005
Springer
An accurate scoring function for database search is crucial for peptide identification using tandem mass spectrometry. Although many mathematical models have been proposed to scor...