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BICOB
2009
Springer
15 years 11 months ago
A New Machine Learning Approach for Protein Phosphorylation Site Prediction in Plants
Protein phosphorylation is a crucial regulatory mechanism in various organisms. With recent improvements in mass spectrometry, phosphorylation site data are rapidly accumulating. D...
Jianjiong Gao, Ganesh Kumar Agrawal, Jay J. Thelen...
RECOMB
1998
Springer
15 years 10 months ago
Alignments without low-scoring regions
Given a strong match between regions of two sequences, how far can the match be meaningfully extended if gaps are allowed in the resulting alignment? The aim is to avoid searching...
Zheng Zhang 0004, Piotr Berman, Webb Miller
AB
2007
Springer
15 years 10 months ago
Prefix Reversals on Binary and Ternary Strings
Given a permutation , the application of prefix reversal f(i) to reverses the order of the first i elements of . The problem of Sorting By Prefix Reversals (also known as pancake ...
Cor A. J. Hurkens, Leo van Iersel, Judith Keijsper...
CIBCB
2007
IEEE
15 years 10 months ago
Associative Artificial Neural Network for Discovery of Highly Correlated Gene Groups Based on Gene Ontology and Gene Expression
Abstract-- The advance of high-throughput experimental technologies poses continuous challenges to computational data analysis in functional and comparative genomics studies. Gene ...
Ji He, Xinbin Dai, Xuechun Zhao
RECOMB
2010
Springer
15 years 10 months ago
MoGUL: Detecting Common Insertions and Deletions in a Population
Abstract. While the discovery of structural variants in the human population is ongoing, most methods for this task assume that the genome is sequenced to high coverage (e.g. 40x),...
Seunghak Lee, Eric Xing, Michael Brudno