Protein phosphorylation is a crucial regulatory mechanism in various organisms. With recent improvements in mass spectrometry, phosphorylation site data are rapidly accumulating. D...
Jianjiong Gao, Ganesh Kumar Agrawal, Jay J. Thelen...
Given a strong match between regions of two sequences, how far can the match be meaningfully extended if gaps are allowed in the resulting alignment? The aim is to avoid searching...
Given a permutation , the application of prefix reversal f(i) to reverses the order of the first i elements of . The problem of Sorting By Prefix Reversals (also known as pancake ...
Cor A. J. Hurkens, Leo van Iersel, Judith Keijsper...
Abstract-- The advance of high-throughput experimental technologies poses continuous challenges to computational data analysis in functional and comparative genomics studies. Gene ...
Abstract. While the discovery of structural variants in the human population is ongoing, most methods for this task assume that the genome is sequenced to high coverage (e.g. 40x),...