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RECOMB
2002
Springer
16 years 7 months ago
Tests for gene clustering
Comparing chromosomal gene order in two or more related species is an important approach to studying the forces that guide genome organization and evolution. Linked clusters of si...
Dannie Durand, David Sankoff
RECOMB
2001
Springer
16 years 7 months ago
Predicting the beta-helix fold from protein sequence data
A method is presented that uses b-strand interactions to predict the parallel right-handed b-helix super-secondary structural motif in protein sequences. A program called BetaWrap...
Phil Bradley, Lenore Cowen, Matthew Menke, Jonatha...
RECOMB
2001
Springer
16 years 7 months ago
Geometric algorithms for the analysis of 2D-electrophoresis gels
In proteomics 2?dimensional gel electrophoresis (2?DE) is a separation technique for proteins. The resulting protein spots can be identified by either using picking robots and sub...
Alon Efrat, Frank Hoffmann, Klaus Kriegel, Christo...
RECOMB
2009
Springer
16 years 1 months ago
Pseudo Boolean Programming for Partially Ordered Genomes
Comparing genomes of different species is a crucial problem in comparative genomics. Different measures have been proposed to compare two genomes: number of common intervals, num...
Sébastien Angibaud, Guillaume Fertin, Annel...
RECOMB
2010
Springer
16 years 1 months ago
Hierarchical Generative Biclustering for MicroRNA Expression Analysis
Clustering methods are a useful and common first step in gene expression studies, but the results may be hard to interpret. We bring in explicitly an indicator of which genes tie ...
José Caldas, Samuel Kaski