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CCE
2008
15 years 6 months ago
Experiments and CFD simulation of ferrous biooxidation in a bubble column bioreactor
In the present attempt a set of experiments and a 3D simulation using a commercially available computational fluid dynamics package (FLUENT) were adopted to investigate complex beh...
S. M. Mousavi, A. Jafari, S. Yaghmaei, M. Vossough...
234
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RECOMB
2001
Springer
16 years 7 months ago
Finding motifs using random projections
motif discovery problem abstracts the task of discovering short, conserved sites in genomic DNA. Pevzner and Sze recently described a precise combinatorial formulation of motif di...
Jeremy Buhler, Martin Tompa
RECOMB
2002
Springer
16 years 7 months ago
From promoter sequence to expression: a probabilistic framework
We present a probabilistic framework that models the process by which transcriptional binding explains the mRNA expression of different genes. Our joint probabilistic model unifie...
Eran Segal, Yoseph Barash, Itamar Simon, Nir Fried...
RECOMB
2003
Springer
16 years 7 months ago
Physical network models and multi-source data integration
We develop a new framework for inferring models of transcriptional regulation. The models in this approach, which we call physical models, are constructed on the basis of verifiab...
Chen-Hsiang Yeang, Tommi Jaakkola
RECOMB
2010
Springer
15 years 8 months ago
Leveraging Sequence Classification by Taxonomy-Based Multitask Learning
In this work we consider an inference task that biologists are very good at: deciphering biological processes by bringing together knowledge that has been obtained by experiments u...
Christian Widmer, Jose Leiva, Yasemin Altun, Gunna...