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WABI
2007
Springer
109views Bioinformatics» more  WABI 2007»
16 years 21 days ago
A Novel Method for Signal Transduction Network Inference from Indirect Experimental Evidence
In this paper we introduce a new method of combined synthesis and inference of biological signal transduction networks. A main idea of our method lies in representing observed cau...
Réka Albert, Bhaskar DasGupta, Riccardo Don...
CMSB
2004
Springer
16 years 14 min ago
Brane Calculi
We introduce a family of process calculi with dynamic nested membranes. In contrast to related calculi, including some developed for biological applications, active entities here a...
Luca Cardelli
CSB
2005
IEEE
141views Bioinformatics» more  CSB 2005»
16 years 6 days ago
A Parallel Algorithm for Clustering Protein-Protein Interaction Networks
The increasing availability of interaction graphs requires new resource-efficient tools capable of extracting valuable biological knowledge from these networks. In this paper we ...
Qiaofeng Yang, Stefano Lonardi
ICPR
2000
IEEE
15 years 10 months ago
Convexity-Based Camouflage Breaking
This paper presents biological evidence for camouflage breaking using the convexity of the intensity function. Some animals use apatetic coloring especially to prevent their detec...
Ariel Tankus, Yehezkel Yeshurun
JCSS
2007
116views more  JCSS 2007»
15 years 6 months ago
The most probable annotation problem in HMMs and its application to bioinformatics
Hidden Markov models (HMMs) are often used for biological sequence annotation. Each sequence feature is represented by a collection of states with the same label. In annotating a ...
Brona Brejová, Daniel G. Brown 0001, Tom&aa...