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1992
Tsinghua U.
15 years 10 months ago
The CODE 2.0 graphical parallel programming language
CODE 2.0 is a graphical parallel programming system that targets the three goals of ease of use, portability, and production of efficient parallel code. Ease of use is provided by...
Peter Newton, James C. Browne
KDD
2005
ACM
153views Data Mining» more  KDD 2005»
16 years 7 months ago
Improving discriminative sequential learning with rare--but--important associations
Discriminative sequential learning models like Conditional Random Fields (CRFs) have achieved significant success in several areas such as natural language processing, information...
Xuan Hieu Phan, Minh Le Nguyen, Tu Bao Ho, Susumu ...
RECOMB
2008
Springer
16 years 7 months ago
DLIGHT - Lateral Gene Transfer Detection Using Pairwise Evolutionary Distances in a Statistical Framework
Abstract. This paper presents an algorithm to detect lateral gene transfer (LGT) on the basis of pairwise evolutionary distances. The prediction is made from a likelihood ratio der...
Christophe Dessimoz, Daniel Margadant, Gaston H. G...
RECOMB
2008
Springer
16 years 7 months ago
Algorithms for Exploring the Space of Gene Tree/Species Tree Reconciliations
We describe algorithms to explore the space of all possible reconciliations between a gene tree and a species tree. We propose an algorithm for generating a random reconciliation, ...
Jean-Philippe Doyon, Cedric Chauve, Sylvie Hamel
RECOMB
2007
Springer
16 years 7 months ago
A Heuristic Algorithm for Reconstructing Ancestral Gene Orders with Duplications
Accurately reconstructing the large-scale gene order in an ancestral genome is a critical step to better understand genome evolution. In this paper, we propose a heuristic algorith...
Jian Ma, Aakrosh Ratan, Louxin Zhang, Webb Miller,...