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IPPS
2010
IEEE
15 years 4 months ago
How Algorithm Definition Language (ADL) improves the performance of SmartGridSolve applications
In this paper, we study the importance of languages for the specification of algorithms in high performance Grid computing. We present one such language, the Algorithm Definition ...
Michele Guidolin, Thomas Brady, Alexey L. Lastovet...
SAC
2010
ACM
16 years 1 months ago
Software transactional memory for implicitly parallel functional language
During the last decade, software transactional memory (STM) gained wide popularity in many areas of parallel computing. In this paper, we introduce LISP-derived language equipped ...
Petr Krajca, Vilém Vychodil
RECOMB
2006
Springer
16 years 7 months ago
Algorithms to Distinguish the Role of Gene-Conversion from Single-Crossover Recombination in the Derivation of SNP Sequences in
Meiotic recombination is a fundamental biological event and one of the principal evolutionary forces responsible for shaping genetic variation within species. In addition to its fu...
Yun S. Song, Zhihong Ding, Dan Gusfield, Charles H...
PPOPP
2006
ACM
16 years 21 days ago
Performance characterization of molecular dynamics techniques for biomolecular simulations
Large-scale simulations and computational modeling using molecular dynamics (MD) continues to make significant impacts in the field of biology. It is well known that simulations...
Sadaf R. Alam, Jeffrey S. Vetter, Pratul K. Agarwa...
BMCBI
2010
232views more  BMCBI 2010»
15 years 6 months ago
LucidDraw: Efficiently visualizing complex biochemical networks within MATLAB
Background: Biochemical networks play an essential role in systems biology. Rapidly growing network data and e research activities call for convenient visualization tools to aid i...
Sheng He, Juan Mei, Guiyang Shi, Zhengxiang Wang, ...