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RECOMB
2006
Springer
16 years 7 months ago
Permutation Filtering: A Novel Concept for Significance Analysis of Large-Scale Genomic Data
Permutation of class labels is a common approach to build null distributions for significance analyis of microarray data. It is assumed to produce random score distributions, which...
Stefanie Scheid, Rainer Spang
RECOMB
2001
Springer
16 years 7 months ago
Applications of generalized pair hidden Markov models to alignment and gene finding problems
Hidden Markov models (HMMs) have been successfully applied to a variety of problems in molecular biology, ranging from alignment problems to gene nding and annotation. Alignment p...
Lior Pachter, Marina Alexandersson, Simon Cawley
CLUSTER
2007
IEEE
16 years 1 months ago
Sequential and parallel implementation of a constraint-based algorithm for searching protein structures
— Data mining in biological structure libraries can be a powerful tool to better understand biochemical processes. This article introduces the LISA algorithm which enables the re...
Sascha Hunold, Thomas Rauber, Georg Wille
ESANN
2004
15 years 8 months ago
Reducing connectivity by using cortical modular bands
The way information is represented and processed in a neural network may have important consequences on its computational power and complexity. Basically, information representatio...
Julien Vitay, Nicolas P. Rougier, Fréd&eacu...
ISMB
1997
15 years 8 months ago
RIFLE: Rapid Identification of Microorganisms by Fragment Length Evaluation
Biological macromoleculesrepresent a valuable source of informationfor the identification and phylogenetic classification of microorganisms.Oneof the mostcommonlyused macromolecul...
Henning Hermjakob, Robert Giegerich, Walter Arnold