This talk presents an algorithm to search for all approximate matches of a helix in a genome, where a helix is a combination of sequence and folding constraints. It is a joint wor...
Abstract. We look at some sources of insecurity and difficulty in reasoning about partially ordered runs of distributed ASMs, and propose some techniques to facilitate such reasoni...
This paper is devoted to the speci cation of the Stanford FLASHcache coherence protocol within the ASM formalism. Correctness proofs related to data consistency are presented. Corn...
This paper studies various properties of the least common ancestors mapping, the duplication and mutation costs, and the complexity of nding a species tree from gene trees.