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RECOMB
2002
Springer
16 years 6 months ago
Approximate matching of secondary structures
This talk presents an algorithm to search for all approximate matches of a helix in a genome, where a helix is a combination of sequence and folding constraints. It is a joint wor...
Nadia El-Mabrouk, Mathieu Raffinot
RECOMB
2010
Springer
16 years 1 months ago
Automated High-Dimensional Flow Cytometric Data Analysis
Saumyadipta Pyne, Xinli Hu, Kui Wang, Elizabeth Ro...
ASM
2000
ASM
15 years 11 months ago
Partially Ordered Runs: A Case Study
Abstract. We look at some sources of insecurity and difficulty in reasoning about partially ordered runs of distributed ASMs, and propose some techniques to facilitate such reasoni...
Yuri Gurevich, Dean Rosenzweig
ASM
1998
ASM
15 years 10 months ago
Modeling Cache Coherence Protocol - A Case Study with FLASH
This paper is devoted to the speci cation of the Stanford FLASHcache coherence protocol within the ASM formalism. Correctness proofs related to data consistency are presented. Corn...
Arnaud Durand
RECOMB
1998
Springer
15 years 10 months ago
On reconstructing species trees from gene trees in term of duplications and losses
This paper studies various properties of the least common ancestors mapping, the duplication and mutation costs, and the complexity of nding a species tree from gene trees.
Bin Ma, Ming Li, Louxin Zhang