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ISMB
2007
15 years 9 months ago
Computational prediction of host-pathogen protein-protein interactions
Our major effort in this reporting period comprised functional genomic studies of key genes for carbon metabolite and nodulation/nitrogen fixation in Sinorhizobium meliloti, compar...
Matthew D. Dyer, T. M. Murali, Bruno W. S. Sobral
WOB
2003
140views Bioinformatics» more  WOB 2003»
15 years 8 months ago
Computing Maximum Subsequence in Parallel
The maximum subsequence problem finds the contiguous subsequence of n real numbers with the highest sum. This is an important problem that arises in several contexts in Computatio...
Carlos E. R. Alves, Edson Cáceres, Siang W....
ISMB
1998
15 years 8 months ago
Computational Applications of DNA Structural Scales
We study from a computational standpoint several different physicalscales associatedwith structural features of DNA sequences, including dinucleotide scales such as base stacking ...
Pierre Baldi, Søren Brunak, Yves Chauvin, A...
ISMB
1993
15 years 7 months ago
Computationally Efficient Cluster Representation in Molecular Sequence Megaclassification
Molecular sequence megaclassification is a technique for automated protein sequence analysis and annotation. Implementation of the method has been limited by the need to store and...
David J. States, Nomi L. Harris, Lawrence Hunter
RECOMB
2009
Springer
16 years 1 months ago
Yeast Ancestral Genome Reconstructions: The Possibilities of Computational Methods
In 2006, a debate has risen on the question of the efficiency of bioinformatics methods to reconstruct mammalian ancestral genomes. Three years later, Gordon et al. (PLoS Genetics,...
Eric Tannier