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SAC
2005
ACM
16 years 5 hour ago
A complex biological database querying method
Many biological information systems rely on relational database management systems (RDBMS) to manage high-throughput biological data. While keeping these data well archived, organ...
Jake Yue Chen, John V. Carlis, Ning Gao
CSCW
2004
ACM
15 years 12 months ago
Capturing and supporting contexts for scientific data sharing via the biological sciences collaboratory
Scientific collaboration is largely focused on the sharing and joint analysis of scientific data and results. Today, a movement is afoot within the scientific computing community ...
George Chin Jr., Carina Lansing
DAGSTUHL
2006
15 years 7 months ago
Modeling and Simulating Biological Processes with Stochastic Multiset Rewriting
ed Abstract Membrane systems are models of computation inspired by the structure and the function of biological cells. The model was introduced in 1998 by Gh. Paun and since then m...
Matteo Cavaliere, Sean Sedwards
BMCBI
2008
108views more  BMCBI 2008»
15 years 6 months ago
An analysis of the positional distribution of DNA motifs in promoter regions and its biological relevance
Background: Motif finding algorithms have developed in their ability to use computationally efficient methods to detect patterns in biological sequences. However the posterior cla...
Ana C. Casimiro, Susana Vinga, Ana T. Freitas, Arl...
WALCOM
2010
IEEE
230views Algorithms» more  WALCOM 2010»
16 years 1 months ago
Comparing RNA Structures with Biologically Relevant Operations Cannot Be Done without Strong Combinatorial Restrictions
Abstract. Arc-annotated sequences are useful for representing structural information of RNAs and have been extensively used for comparing RNA structures in both terms of sequence a...
Guillaume Blin, Sylvie Hamel, Stéphane Vial...