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TC
2010
15 years 4 months ago
Network-on-Chip Hardware Accelerators for Biological Sequence Alignment
—The most pervasive compute operation carried out in almost all bioinformatics applications is pairwise sequence homology detection (or sequence alignment). Due to exponentially ...
Souradip Sarkar, Gaurav Ramesh Kulkarni, Partha Pr...
ISCAS
2006
IEEE
101views Hardware» more  ISCAS 2006»
16 years 13 days ago
Neuromimetic ICs and system for parameters extraction in biological neuron models
—This paper presents an analog neuromimetic integrated circuit and an associated system dedicated for experiments of parameters extraction in biological neuron models. The IC bas...
Sylvain Saïghi, Yannick Bornat, Jean Tomas, S...
BIB
2007
139views more  BIB 2007»
15 years 6 months ago
Petri net modelling of biological networks
Mathematical modelling is increasingly used to get insights into the functioning of complex biological networks. In this context, Petri nets (PNs) have recently emerged as a promi...
Claudine Chaouiya
SSDBM
2006
IEEE
147views Database» more  SSDBM 2006»
16 years 13 days ago
Task-Oriented Integrated Use of Biological Web Data Sources
Biological web data sources have now become essential information sources for researchers. However, their use is tedious, labor-intensive, repetitive, and possibly involve the int...
Mustafa Kirac, Ali Cakmak, Gultekin Özsoyoglu
SIGCSE
2004
ACM
112views Education» more  SIGCSE 2004»
15 years 12 months ago
Design patterns for marine biology simulation
We specify and implement a GUI application that simulates marine biological systems by making extensive use of objectoriented design patterns. The key design patterns are model-vi...
Dung Zung Nguyen, Mathias Ricken, Stephen B. Wong