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PVM
2010
Springer
15 years 5 months ago
Toward Performance Models of MPI Implementations for Understanding Application Scaling Issues
Abstract. Designing and tuning parallel applications with MPI, particularly at large scale, requires understanding the performance implications of different choices of algorithms ...
Torsten Hoefler, William Gropp, Rajeev Thakur, Jes...
IMC
2010
ACM
15 years 4 months ago
CloudCmp: comparing public cloud providers
While many public cloud providers offer pay-as-you-go computing, their varying approaches to infrastructure, virtualization, and software services lead to a problem of plenty. To ...
Ang Li, Xiaowei Yang, Srikanth Kandula, Ming Zhang
BMCBI
2011
14 years 10 months ago
A user-friendly web portal for T-Coffee on supercomputers
Background: Parallel T-Coffee (PTC) was the first parallel implementation of the T-Coffee multiple sequence alignment tool. It is based on MPI and RMA mechanisms. Its purpose is t...
Josep Rius Torrento, Fernando Cores, Francesc Sols...
BMCBI
2011
14 years 10 months ago
Protein alignment algorithms with an efficient backtracking routine on multiple GPUs
Background: Pairwise sequence alignment methods are widely used in biological research. The increasing number of sequences is perceived as one of the upcoming challenges for seque...
Jacek Blazewicz, Wojciech Frohmberg, Michal Kierzy...
DAC
2002
ACM
16 years 7 months ago
Scheduler-based DRAM energy management
Previous work on DRAM power-mode management focused on hardware-based techniques and compiler-directed schemes to explicitly transition unused memory modules to low-power operatin...
Victor Delaluz, Anand Sivasubramaniam, Mahmut T. K...
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