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BMCBI
2005
152views more  BMCBI 2005»
15 years 7 months ago
Improved profile HMM performance by assessment of critical algorithmic features in SAM and HMMER
Background: Profile hidden Markov model (HMM) techniques are among the most powerful methods for protein homology detection. Yet, the critical features for successful modelling ar...
Markus Wistrand, Erik L. L. Sonnhammer
WWW
2007
ACM
16 years 7 months ago
Efficient training on biased minimax probability machine for imbalanced text classification
The Biased Minimax Probability Machine (BMPM) constructs a classifier which deals with the imbalanced learning tasks. In this paper, we propose a Second Order Cone Programming (SO...
Xiang Peng, Irwin King
CC
2009
Springer
142views System Software» more  CC 2009»
16 years 7 months ago
Extensible Proof-Producing Compilation
This paper presents a compiler which produces machine code from functions defined in the logic of a theorem prover, and at the same time proves that the generated code executes the...
Magnus O. Myreen, Konrad Slind, Michael J. C. Gord...
ICALP
2009
Springer
16 years 7 months ago
The Number of Symbol Comparisons in QuickSort and QuickSelect
Abstract We revisit the classical QuickSort and QuickSelect algorithms, under a complexity model that fully takes into account the elementary comparisons between symbols composing ...
Brigitte Vallée, James Allen Fill, Julien C...
ICSE
2007
IEEE-ACM
16 years 7 months ago
Agile Methods: Crossing the Chasm
An armada of emerging agile methods of software development (with eXtreme Programming and Scrum being the most broadly used) is both gaining popularity and generating lots of cont...
Frank Maurer, Grigori Melnik
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