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CONCUR
2007
Springer
16 years 28 days ago
Rule-Based Modelling of Cellular Signalling
Abstract. Modelling is becoming a necessity in studying biological signalling pathways, because the combinatorial complexity of such systems rapidly overwhelms intuitive and qualit...
Vincent Danos, Jérôme Feret, Walter F...
FM
2009
Springer
138views Formal Methods» more  FM 2009»
16 years 1 months ago
What Can Formal Methods Bring to Systems Biology?
This position paper argues that the operational modelling approaches from the formal methods community can be applied fruitfully within the systems biology domain. The results can ...
Nicola Bonzanni, K. Anton Feenstra, Wan Fokkink, E...
APAL
2006
112views more  APAL 2006»
15 years 6 months ago
On complexity of verification of interacting agents' behavior
This paper studies the complexity of behavior of multi-agent systems. Behavior properties are formulated using classical temporal logic languages and are checked with respect to t...
Michael I. Dekhtyar, Alexander Ja. Dikovsky, Mars ...
FCT
2005
Springer
16 years 8 days ago
The Complexity of Semilinear Problems in Succinct Representation
We prove completeness results for twenty-three problems in semilinear geometry. These results involve semilinear sets given by additive circuits as input data. If arbitrary real co...
Peter Bürgisser, Felipe Cucker, Paulin Jacob&...
CANDC
2000
ACM
15 years 6 months ago
Sequence Complexity for Biological Sequence Analysis
A new statistical model for DNA considers a sequence to be a mixture of regions with little structure and regions that are approximate repeats of other subsequences, i.e. instance...
Lloyd Allison, Linda Stern, Timothy Edgoose, Trevo...