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» Comparison of Clique-Listing Algorithms
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BMCBI
2008
107views more  BMCBI 2008»
15 years 6 months ago
A mixture model approach to sample size estimation in two-sample comparative microarray experiments
Background: Choosing the appropriate sample size is an important step in the design of a microarray experiment, and recently methods have been proposed that estimate sample sizes ...
Tommy S. Jørstad, Herman Midelfart, Atle M....
COMPUTING
2008
94views more  COMPUTING 2008»
15 years 6 months ago
Two new methods for constructing double-ended priority queues from priority queues
We introduce two data-structural transformations to construct doubleended priority queues from priority queues. To apply our transformations the priority queues exploited must sup...
Amr Elmasry, Claus Jensen, Jyrki Katajainen
BMCBI
2007
106views more  BMCBI 2007»
15 years 6 months ago
Simultaneous identification of long similar substrings in large sets of sequences
Background: Sequence comparison faces new challenges today, with many complete genomes and large libraries of transcripts known. Gene annotation pipelines match these sequences in...
Jürgen Kleffe, Friedrich Möller, Burghar...
BMCBI
2005
101views more  BMCBI 2005»
15 years 6 months ago
PALSSE: A program to delineate linear secondary structural elements from protein structures
Background: The majority of residues in protein structures are involved in the formation of helices and -strands. These distinctive secondary structure patterns can be used to rep...
Indraneel Majumdar, S. Sri Krishna, Nick V. Grishi...
INFOCOM
2000
IEEE
15 years 10 months ago
Minimum Interference Routing with Applications to MPLS Traffic Engineering
This paper presents a new algorithm for dynamic routing of bandwidth guaranteed tunnels where tunnel routing requests arrive one-by-one and there is no a priori knowledge regarding...
Murali S. Kodialam, T. V. Lakshman