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» Comparison of Clique-Listing Algorithms
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IPPS
2009
IEEE
16 years 17 days ago
Dynamic parallelization for RNA structure comparison
In this paper we describe the parallelization of a dynamic programming algorithm used to find common RNA secondary structures including pseudoknots and similar structures. The se...
Eric Snow, Eric Aubanel, Patricia Evans
SPIRE
2005
Springer
15 years 11 months ago
A Multiple Graph Layers Model with Application to RNA Secondary Structures Comparison
Abstract. We introduce a new data structure, called MiGaL for “Multiple Graph Layers”, that is composed of various graphs linked together ions of abstraction/refinement. The n...
Julien Allali, Marie-France Sagot
EMO
2009
Springer
181views Optimization» more  EMO 2009»
15 years 10 months ago
Multi-Objective Particle Swarm Optimizers: An Experimental Comparison
Particle Swarm Optimization (PSO) has received increased attention in the optimization research community since its first appearance. Regarding multi-objective optimization, a con...
Juan José Durillo, José Garcí...
MICCAI
2005
Springer
16 years 6 months ago
Comparison of Vessel Segmentations Using STAPLE
We propose a novel method for the validation of vascular segmentations. Our technique combines morphological operators and the STAPLE algorithm to obtain ground truth of centerline...
Julien Jomier, Vincent LeDigarcher, Stephen R. Ayl...
EUROGP
2004
Springer
145views Optimization» more  EUROGP 2004»
15 years 11 months ago
Toward an Alternative Comparison between Different Genetic Programming Systems
In this paper, we use multi-objective techniques to compare different genetic programming systems, permitting our comparison to concentrate on the effect of representation and sepa...
Nguyen Xuan Hoai, Robert I. McKay, Daryl Essam, Hu...