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IPPS
2009
IEEE
16 years 24 days ago
Parallel reconstruction of neighbor-joining trees for large multiple sequence alignments using CUDA
Computing large multiple protein sequence alignments using progressive alignment tools such as ClustalW requires several hours on state-of-the-art workstations. ClustalW uses a th...
Yongchao Liu, Bertil Schmidt, Douglas L. Maskell
ICIP
2008
IEEE
16 years 18 days ago
Model-based compression of nonstationary landmark shape sequences
We have proposed a novel model-based compression technique for nonstationary landmark shape data extracted from video sequences. The main goal is to develop a technique for the co...
Samarjit Das, Namrata Vaswani
IPPS
2006
IEEE
16 years 5 days ago
Multiple sequence alignment by quantum genetic algorithm
In this paper we describe a new approach for the well known problem in bioinformatics: Multiple Sequence Alignment (MSA). MSA is fundamental task as it represents an essential pla...
L. Abdesslem, M. Soham, B. Mohamed
ICCV
2005
IEEE
15 years 11 months ago
Integrating the Effects of Motion, Illumination and Structure in Video Sequences
Most work in computer vision has concentrated on studying the individual effects of motion and illumination on a 3D object. In this paper, we present a theory for combining the ef...
Yilei Xu, Amit K. Roy Chowdhury
CIKM
2005
Springer
15 years 11 months ago
Exact match search in sequence data using suffix trees
We study suitable indexing techniques to support efficient exact match search in large biological sequence databases. We propose a suffix tree (ST) representation, called STA-DF, ...
Mihail Halachev, Nematollaah Shiri, Anand Thamildu...