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RECOMB
2006
Springer
16 years 7 months ago
Probabilistic Paths for Protein Complex Inference
Understanding how individual proteins are organized into complexes and pathways is a significant current challenge. We introduce new algorithms to infer protein complexes by combin...
Hailiang Huang, Lan V. Zhang, Frederick P. Roth, J...
RECOMB
2005
Springer
16 years 7 months ago
A Hidden Markov Model Based Scoring Function for Mass Spectrometry Database Search
An accurate scoring function for database search is crucial for peptide identification using tandem mass spectrometry. Although many mathematical models have been proposed to scor...
Yunhu Wan, Ting Chen
165
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RECOMB
2004
Springer
16 years 7 months ago
Multiple Genome Alignment by Clustering Pairwise Matches
We have developed a multiple genome alignment algorithm by using a sequence clustering algorithm to combine local pairwise genome sequence matches produced by pairwise genome align...
Jeong-Hyeon Choi, Kwangmin Choi, Hwan-Gue Cho, Sun...
RECOMB
2003
Springer
16 years 7 months ago
A multi-expert system for the automatic detection of protein domains from sequence information
We describe a novel method for detecting the domain structure of a protein from sequence information alone. The method is based on analyzing multiple sequence alignments that are ...
Niranjan Nagarajan, Golan Yona
OSDI
2008
ACM
16 years 7 months ago
SQCK: A Declarative File System Checker
The lowly state of the art for file system checking and repair does not match what is needed to keep important data available for users. Current file system checkers, such as e2fs...
Haryadi S. Gunawi, Abhishek Rajimwale, Andrea C. A...