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BIBM
2010
IEEE
158views Bioinformatics» more  BIBM 2010»
15 years 4 months ago
Protein-protein interaction prediction via Collective Matrix Factorization
Abstract--Protein-protein interactions (PPI) play an important role in cellular processes and metabolic processes within a cell. An important task is to determine the existence of ...
Qian Xu, Evan Wei Xiang, Qiang Yang
ICSE
2010
IEEE-ACM
15 years 4 months ago
Identifying crosscutting concerns using historical code changes
Detailed knowledge about implemented concerns in the source code is crucial for the cost-effective maintenance and successful evolution of large systems. Concern mining techniques...
Bram Adams, Zhen Ming Jiang, Ahmed E. Hassan
BMCBI
2010
143views more  BMCBI 2010»
15 years 3 months ago
A genome alignment algorithm based on compression
Background: Traditional genome alignment methods consider sequence alignment as a variation of the string edit distance problem, and perform alignment by matching characters of th...
Minh Duc Cao, Trevor I. Dix, Lloyd Allison
CONCURRENCY
2010
172views more  CONCURRENCY 2010»
15 years 3 months ago
Modeling of tsunami waves and atmospheric swirling flows with graphics processing unit (GPU) and radial basis functions (RBF)
The faster growth curves in the speed of GPUs relative to CPUs in the past decade and its rapidly gained popularity have spawned a new area of development in computational technol...
Jessica Schmidt, Cécile Piret, Nan Zhang, B...
NAR
2011
330views Computer Vision» more  NAR 2011»
15 years 1 months ago
Hymenoptera Genome Database: integrated community resources for insect species of the order Hymenoptera
The Hymenoptera Genome Database (HGD) is a comprehensive model organism database that caters to the needs of scientists working on insect species of the order Hymenoptera. This sy...
Monica C. Munoz-Torres, Justin T. Reese, Christoph...