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» Comonadic Notions of Computation
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POPL
2008
ACM
16 years 6 months ago
The intensional content of Rice's theorem
The proofs of major results of Computability Theory like Rice, Rice-Shapiro or Kleene's fixed point theorem hide more information of what is usually expressed in their respec...
Andrea Asperti
RECOMB
2005
Springer
16 years 6 months ago
Combinatorial Genetic Regulatory Network Analysis Tools for High Throughput Transcriptomic Data
: A series of genome-scale algorithms and high-performance implementations is described and shown to be useful in the genetic analysis of gene transcription. With them it is possib...
Elissa J. Chesler, Michael A. Langston
RECOMB
2004
Springer
16 years 6 months ago
Chromosomal breakpoint re-use in the inference of genome sequence rearrangement
In order to apply gene-order rearrangement algorithms to the comparison of genome sequences, Pevzner and Tesler [9] bypass gene finding and ortholog identification, and use the or...
David Sankoff, Phil Trinh
RECOMB
2003
Springer
16 years 6 months ago
On de novo interpretation of tandem mass spectra for peptide identification
The correct interpretation of tandem mass spectra is a difficult problem, even when it is limited to scoring peptides against a database. De novo sequencing is considerably harder...
Vineet Bafna, Nathan Edwards
ICALP
2009
Springer
16 years 6 months ago
High Complexity Tilings with Sparse Errors
Abstract. Tile sets and tilings of the plane appear in many topics ranging from logic (the Entscheidungsproblem) to physics (quasicrystals). The idea is to enforce some global prop...
Bruno Durand, Andrei E. Romashchenko, Alexander Sh...