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» Combinatorial Pattern Matching
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BMCBI
2006
145views more  BMCBI 2006»
15 years 5 months ago
Fast-Find: A novel computational approach to analyzing combinatorial motifs
Background: Many vital biological processes, including transcription and splicing, require a combination of short, degenerate sequence patterns, or motifs, adjacent to defined seq...
Micah Hamady, Erin Peden, Rob Knight, Ravinder Sin...
106
Voted
CONCUR
2004
Springer
15 years 11 months ago
Compiling Pattern Matching in Join-Patterns
Qin Ma 0002, Luc Maranget
CPM
2009
Springer
189views Combinatorics» more  CPM 2009»
16 years 11 days ago
Average-Case Analysis of Perfect Sorting by Reversals
A sequence of reversals that takes a signed permutation to the identity is perfect if it preserves all common intervals between the permutation and the identity. The problem of com...
Mathilde Bouvel, Cedric Chauve, Marni Mishna, Domi...