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BMCBI
2006
112views more  BMCBI 2006»
15 years 6 months ago
A phylogenomic gene cluster resource: the Phylogenetically Inferred Groups (PhIGs) database
Background: We present here the PhIGs database, a phylogenomic resource for sequenced genomes. Although many methods exist for clustering gene families, very few attempt to create...
Paramvir S. Dehal, Jeffrey L. Boore
196
Voted
BMCBI
2006
166views more  BMCBI 2006»
15 years 6 months ago
SEQOPTICS: a protein sequence clustering system
Background: Protein sequence clustering has been widely used as a part of the analysis of protein structure and function. In most cases single linkage or graph-based clustering al...
Yonghui Chen, Kevin D. Reilly, Alan P. Sprague, Zh...
BMCBI
2007
116views more  BMCBI 2007»
15 years 6 months ago
Clustering protein environments for function prediction: finding PROSITE motifs in 3D
Background: Structural genomics initiatives are producing increasing numbers of threedimensional (3D) structures for which there is little functional information. Structure-based ...
Sungroh Yoon, Jessica C. Ebert, Eui-Young Chung, G...
CIKM
2009
Springer
15 years 11 months ago
Density-based clustering using graphics processors
During the last few years, GPUs have evolved from simple devices for the display signal preparation into powerful coprocessors that do not only support typical computer graphics t...
Christian Böhm, Robert Noll, Claudia Plant, B...
DASFAA
2004
IEEE
123views Database» more  DASFAA 2004»
15 years 10 months ago
A Meta-search Method with Clustering and Term Correlation
A meta-search engine propagates user queries to its participant search engines following a server selection strategy. To facilitate server selection, the metasearch engine must ke...
Dyce Jing Zhao, Dik Lun Lee, Qiong Luo