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BMCBI
2006
129views more  BMCBI 2006»
15 years 6 months ago
Functional clustering of yeast proteins from the protein-protein interaction network
Background: The abundant data available for protein interaction networks have not yet been fully understood. New types of analyses are needed to reveal organizational principles o...
Taner Z. Sen, Andrzej Kloczkowski, Robert L. Jerni...
APPML
2007
92views more  APPML 2007»
15 years 7 months ago
Topological grammars for data approximation
A method of topological grammars is proposed for multidimensional data approximation. For data with complex topology we define a principal cubic complex of low dimension and give...
Alexander N. Gorban, Neil R. Sumner, Andrei Yu. Zi...
WISE
2009
Springer
16 years 4 months ago
Spectral Clustering in Social-Tagging Systems
Social tagging is an increasingly popular phenomenon with substantial impact on the way we perceive and understand the Web. For the many Web resources that are not self-descriptive...
Alexandros Nanopoulos, Hans-Henning Gabriel, Myra ...
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ALMOB
2008
112views more  ALMOB 2008»
15 years 7 months ago
Metabolite-based clustering and visualization of mass spectrometry data using one-dimensional self-organizing maps
Background: One of the goals of global metabolomic analysis is to identify metabolic markers that are hidden within a large background of data originating from high-throughput ana...
Peter Meinicke, Thomas Lingner, Alexander Kaever, ...
BMCBI
2010
145views more  BMCBI 2010»
15 years 7 months ago
Clustering metagenomic sequences with interpolated Markov models
Background: Sequencing of environmental DNA (often called metagenomics) has shown tremendous potential to uncover the vast number of unknown microbes that cannot be cultured and s...
David R. Kelley, Steven L. Salzberg