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AMAI
2008
Springer
15 years 6 months ago
Set based logic programming
In a previous paper [BMR01], the authors showed that the mechanism underlying Logic Programming can be extended to handle the situation where the atoms are interpreted as subsets o...
Howard A. Blair, Victor W. Marek, Jeffrey B. Remme...
BIODATAMINING
2008
96views more  BIODATAMINING 2008»
15 years 6 months ago
Fast approximate hierarchical clustering using similarity heuristics
Background: Agglomerative hierarchical clustering (AHC) is a common unsupervised data analysis technique used in several biological applications. Standard AHC methods require that...
Meelis Kull, Jaak Vilo
BMCBI
2010
130views more  BMCBI 2010»
15 years 6 months ago
The behaviour of random forest permutation-based variable importance measures under predictor correlation
Background: Random forests (RF) have been increasingly used in applications such as genome-wide association and microarray studies where predictor correlation is frequently observ...
Kristin K. Nicodemus, James D. Malley, Carolin Str...
BIOINFORMATICS
2007
137views more  BIOINFORMATICS 2007»
15 years 6 months ago
Annotation-based distance measures for patient subgroup discovery in clinical microarray studies
: Background Clustering algorithms are widely used in the analysis of microarray data. In clinical studies, they are often applied to find groups of co-regulated genes. Clustering...
Claudio Lottaz, Joern Toedling, Rainer Spang
BMCBI
2010
96views more  BMCBI 2010»
15 years 6 months ago
A statistical framework for differential network analysis from microarray data
Background: It has been long well known that genes do not act alone; rather groups of genes act in consort during a biological process. Consequently, the expression levels of gene...
Ryan Gill, Somnath Datta, Susmita Datta