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» Challenges for knowledge discovery in biology
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CSB
2005
IEEE
189views Bioinformatics» more  CSB 2005»
15 years 11 months ago
Learning Yeast Gene Functions from Heterogeneous Sources of Data Using Hybrid Weighted Bayesian Networks
We developed a machine learning system for determining gene functions from heterogeneous sources of data sets using a Weighted Naive Bayesian Network (WNB). The knowledge of gene ...
Xutao Deng, Huimin Geng, Hesham H. Ali
ITNG
2006
IEEE
16 years 3 days ago
Biomedical Term Disambiguation: An Application to Gene-Protein Name Disambiguation
The huge volumes of biomedical texts available online drives the increasing need for automated techniques to analyze and extract knowledge from these repositories of information. ...
Hisham Al-Mubaid, Ping Chen
BMCBI
2008
105views more  BMCBI 2008»
15 years 6 months ago
A gene pattern mining algorithm using interchangeable gene sets for prokaryotes
Background: Mining gene patterns that are common to multiple genomes is an important biological problem, which can lead us to novel biological insights. When family classification...
Meng Hu, Kwangmin Choi, Wei Su, Sun Kim, Jiong Yan...
BMCBI
2008
126views more  BMCBI 2008»
15 years 6 months ago
Methods for evaluating gene expression from Affymetrix microarray datasets
Background: Affymetrix high density oligonucleotide expression arrays are widely used across all fields of biological research for measuring genome-wide gene expression. An import...
Ning Jiang, Lindsey J. Leach, Xiaohua Hu, Elena Po...
BMCBI
2010
81views more  BMCBI 2010»
15 years 5 months ago
Empirical Bayes Analysis of Sequencing-based Transcriptional Profiling without Replicates
Background: Recent technological advancements have made high throughput sequencing an increasingly popular approach for transcriptome analysis. Advantages of sequencing-based tran...
Zhijin Wu, Bethany D. Jenkins, Tatiana A. Rynearso...