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VISSYM
2004
15 years 7 months ago
Case Study: Visualization of annotated DNA sequences
DNA sequences and their annotations form ever expanding data sets. Proper explorations of such data sets require new tools for visualization and analysis. In this case study, we h...
Tim H. J. M. Peeters, Huub van de Wetering, Mark W...
BMCBI
2006
72views more  BMCBI 2006»
15 years 6 months ago
Cluster analysis of networks generated through homology: automatic identification of important protein communities involved in c
Background: Protein-protein interactions have traditionally been studied on a small scale, using classical biochemical methods to investigate the proteins of interest. More recent...
Pall F. Jonsson, Tamara Cavanna, Daniel Zicha, Pau...
JCB
2008
144views more  JCB 2008»
15 years 6 months ago
Multi-Break Rearrangements and Breakpoint Re-Uses: From Circular to Linear Genomes
Multi-break rearrangements break a genome into multiple fragments and further glue them together in a new order. While 2-break rearrangements represent standard reversals, fusions...
Max A. Alekseyev
BMCBI
2005
152views more  BMCBI 2005»
15 years 6 months ago
An ant colony optimisation algorithm for the 2D and 3D hydrophobic polar protein folding problem
Background: The protein folding problem is a fundamental problems in computational molecular biology and biochemical physics. Various optimisation methods have been applied to for...
Alena Shmygelska, Holger H. Hoos
ATAL
2011
Springer
14 years 6 months ago
Human-like memory retrieval mechanisms for social companions
This paper demonstrates a biologically- and psychologicallyinspired human-like computational memory focusing on the retrieval mechanisms – Spreading Activation and Compound Cue ...
Mei Yii Lim, Ruth Aylett, Patrícia Amâ...