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ASM
2010
ASM
16 years 3 months ago
Lightweight Modeling of Java Virtual Machine Security Constraints
The Java programming language has been widely described as secure by design. Nevertheless, a number of serious security vulnerabilities have been discovered in Java, particularly i...
Mark C. Reynolds
ASM
2010
ASM
16 years 1 months ago
Alloy+HotCore: A Fast Approximation to Unsat Core
Identifying a minimal unsatisfiable core in an Alloy model proved to be a very useful feature in many scenarios. We extend this concept to hot core, an approximation to unsat core...
Nicolás D'Ippolito, Marcelo F. Frias, Juan ...
DNA
2009
Springer
100views Bioinformatics» more  DNA 2009»
16 years 1 months ago
Self-assembly of the Discrete Sierpinski Carpet and Related Fractals
It is well known that the discrete Sierpinski triangle can be defined as the nonzero residues modulo 2 of Pascal’s triangle, and that from this definition one can easily const...
Steven M. Kautz, James I. Lathrop
AB
2007
Springer
16 years 22 days ago
Relating Attractors and Singular Steady States in the Logical Analysis of Bioregulatory Networks
Abstract. In 1973 R. Thomas introduced a logical approach to modeling and analysis of bioregulatory networks. Given a set of Boolean functions describing the regulatory interaction...
Heike Siebert, Alexander Bockmayr
COCOA
2007
Springer
16 years 21 days ago
A Lagrangian Relaxation Approach for the Multiple Sequence Alignment Problem
Abstract. We present a branch-and-bound (bb) algorithm for the multiple sequence alignment problem (MSA), one of the most important problems in computational biology. The upper bou...
Ernst Althaus, Stefan Canzar