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CSDA
2008
158views more  CSDA 2008»
15 years 6 months ago
Outlier identification in high dimensions
A computationally fast procedure for identifying outliers is presented, that is particularly effective in high dimensions. This algorithm utilizes simple properties of principal c...
Peter Filzmoser, Ricardo A. Maronna, Mark Werner
ICCMS
2009
118views more  ICCMS 2009»
15 years 4 months ago
Optimized Parallel Implementation of Gillespie's First Reaction Method on Graphics Processing Units
The simulation of chemical reacting systems is one of the most challenging topics in Systems Biology, due to their complexity and inherent randomness. The Gillespie's Stochas...
Cristian Dittamo, Davide Cangelosi
ICCABS
2011
14 years 10 months ago
High-performance biocomputing for simulating the spread of contagion over large contact networks
Abstract—Many important biological problems can be modeled as contagion diffusion processes over interaction networks. This paper shows how the EpiSimdemics interaction-based sim...
Keith R. Bisset, Ashwin M. Aji, Madhav V. Marathe,...
BIOCOMP
2006
15 years 8 months ago
PAC: Progressive Alignment with Consensus Sequences
Computation of multiple sequence alignments is one of the major open problems in computational molecular biology. The purpose of this study was to provide a new method, PAC (Progre...
Ke Liu, Mansur H. Samadzadeh
BMCBI
2005
161views more  BMCBI 2005»
15 years 6 months ago
Non-linear mapping for exploratory data analysis in functional genomics
Background: Several supervised and unsupervised learning tools are available to classify functional genomics data. However, relatively less attention has been given to exploratory...
Francisco Azuaje, Haiying Wang, Alban Chesneau