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ISMB
1996
15 years 8 months ago
The Megaprior Heuristic for Discovering Protein Sequence Patterns
Several computeralgorithms for discovering patterns in groups of protein sequences are in use that are basedon fitting the parametersof a statistical model to a group of related s...
Timothy L. Bailey, Michael Gribskov
TCSV
2010
15 years 1 months ago
Solving Streaming Capacity Problems in P2P VoD Systems
Abstract--Peer-to-peer (P2P) video-on-demand (VoD) is a popular Internet service for a large number of concurrent users. Streaming capacity in a P2P VoD system is defined as the ma...
Yifeng He, Ling Guan
RECOMB
2012
Springer
13 years 9 months ago
Reconstructing Boolean Models of Signaling
Abstract. Since the first emergence of protein-protein interaction networks, more than a decade ago, they have been viewed as static scaffolds of the signaling-regulatory events ...
Roded Sharan, Richard M. Karp
FCCM
2009
IEEE
169views VLSI» more  FCCM 2009»
16 years 1 months ago
RC-BLASTn: Implementation and Evaluation of the BLASTn Scan Function
BLASTn is a tool universally used by biologists to identify similarities between nucleotide based biological genome sequences. This report describes an FPGA based hardware impleme...
Siddhartha Datta, Parag Beeraka, Ron Sass
ICPR
2008
IEEE
16 years 1 months ago
An extended version of the k-means method for overlapping clustering
This paper deals with overlapping clustering, a trade off between crisp and fuzzy clustering. It has been motivated by recent applications in various domains such as information r...
Guillaume Cleuziou