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RECOMB
2007
Springer
16 years 7 months ago
An Efficient Method for Dynamic Analysis of Gene Regulatory Networks and in silico Gene Perturbation Experiments
With the increasing availability of experimental data on gene-gene and protein-protein interactions, modeling of gene regulatory networks has gained a special attention lately. To ...
Abhishek Garg, Ioannis Xenarios, Luis Mendoza, Gio...
RECOMB
2004
Springer
16 years 7 months ago
Using motion planning to study RNA folding kinetics
We propose a novel, motion planning based approach to approximately map the energy landscape of an RNA molecule. Our method is based on the successful probabilistic roadmap motion...
Xinyu Tang, Bonnie Kirkpatrick, Shawna L. Thomas, ...
ICPP
2007
IEEE
16 years 1 months ago
Efficient Parallel Algorithm for Optimal Three-Sequences Alignment
Sequence alignment is a fundamental problem in the computational biology. Many alignment methods have been proposed in the literature, such as pair-wise sequence alignment (2SA), ...
Chun-Yuan Lin, Chen Tai Huang, Yeh-Ching Chung, Ch...
BMCBI
2005
122views more  BMCBI 2005»
15 years 6 months ago
Bayesian coestimation of phylogeny and sequence alignment
Background: Two central problems in computational biology are the determination of the alignment and phylogeny of a set of biological sequences. The traditional approach to this p...
Gerton Lunter, István Miklós, Alexei...
ICPR
2008
IEEE
16 years 7 months ago
3D rotation invariant local binary patterns
We present a novel method for the fast computation of rotation invariant "local binary patterns" (LBP) on 3D volume data. Unlike a previous publication on 3D LBP, this n...
Hans Burkhardt, Janis Fehr