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DAC
2007
ACM
16 years 7 months ago
Synthesizing Stochasticity in Biochemical Systems
Randomness is inherent to biochemistry: at each instant, the sequence of reactions that fires is a matter of chance. Some biological systems exploit such randomness, choosing betw...
Brian Fett, Jehoshua Bruck, Marc D. Riedel
ASM
2010
ASM
16 years 3 months ago
Synchronous Message Passing and Semaphores: An Equivalence Proof
A natural encoding of synchronous message exchange with direct wait-control is proved to be equivalent in a distributed environment to a refinement which uses semaphores to implem...
Iain Craig, Egon Börger
ASM
2010
ASM
16 years 3 months ago
Towards Validation of Requirements Models
Abstract. The aim of this paper is to gradually introduce formalism in the requirement engineering phase in order to facilitate its validation. We analyze and elicit our requiremen...
Atif Mashkoor, Abderrahman Matoussi
ASM
2010
ASM
16 years 1 months ago
An Imperative Extension to Alloy
We extend the Alloy language with the standard imperative constructs; we show the mix of declarative and imperative constructs to be useful in modeling dynamic systems. We present ...
Joseph P. Near, Daniel Jackson
AB
2007
Springer
16 years 27 days ago
Attenuation Regulation as a Term Rewriting System
Abstract The classical attenuation regulation of gene expression in bacteria is considered. We propose to represent the secondary RNA structure in the leader region of a gene or an...
Eugene Asarin, Thierry Cachat, Alexander Seliverst...