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BIB
2010
103views more  BIB 2010»
15 years 3 months ago
Challenges of sequencing human genomes
Massively parallel sequencing technologies continue to alter the study of human genetics. As the cost of sequencing declines, next-generation sequencing (NGS) instruments and data...
Daniel C. Koboldt, Li Ding, Elaine R. Mardis, Rich...
CLOUDCOM
2010
Springer
15 years 3 months ago
Voronoi-Based Geospatial Query Processing with MapReduce
Geospatial queries (GQ) have been used in a wide variety of applications such as decision support systems, profile-based marketing, bioinformatics and GIS. Most of the existing qu...
Afsin Akdogan, Ugur Demiryurek, Farnoush Banaei Ka...
IJKDB
2010
141views more  IJKDB 2010»
15 years 3 months ago
Mining Frequent Boolean Expressions: Application to Gene Expression and Regulatory Modeling
Regulatory network analysis and other bioinformatics tasks require the ability to induce and represent arbitrary boolean expressions from data sources. We introduce a novel framew...
Mohammed Javeed Zaki, Naren Ramakrishnan, Lizhuang...
CORR
2011
Springer
181views Education» more  CORR 2011»
15 years 1 months ago
Compressed String Dictionaries
The problem of storing a set of strings – a string dictionary – in compact form appears naturally in many cases. While classically it has represented a small part of the whole ...
Nieves R. Brisaboa, Rodrigo Cánovas, Miguel...
BCB
2010
213views Bioinformatics» more  BCB 2010»
15 years 1 months ago
Markov clustering of protein interaction networks with improved balance and scalability
Markov Clustering (MCL) is a popular algorithm for clustering networks in bioinformatics such as protein-protein interaction networks and protein similarity networks. An important...
Venu Satuluri, Srinivasan Parthasarathy, Duygu Uca...